Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 RN7SL665P-201ENST00000578793 300 ntBASIC13.67□□□□□ -0.22
GABREP78334 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GABREP78334 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 LINC02228-204ENST00000642115 2962 ntBASIC13.67□□□□□ -0.22
GABREP78334 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GABREP78334 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.67□□□□□ -0.22
GABREP78334 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GABREP78334 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.67□□□□□ -0.22
GABREP78334 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GABREP78334 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
GABREP78334 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.66□□□□□ -0.22
GABREP78334 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.66□□□□□ -0.22
GABREP78334 DDX39AP1-201ENST00000445147 1181 ntBASIC13.66□□□□□ -0.22
GABREP78334 AC018638.5-201ENST00000450885 754 ntBASIC13.66□□□□□ -0.22
GABREP78334 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.66□□□□□ -0.22
GABREP78334 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.66□□□□□ -0.22
GABREP78334 RNA5SP406-201ENST00000516106 112 ntBASIC13.66□□□□□ -0.22
GABREP78334 AC012158.2-201ENST00000536546 354 ntBASIC13.66□□□□□ -0.22
GABREP78334 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.66□□□□□ -0.22
GABREP78334 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GABREP78334 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GABREP78334 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.65□□□□□ -0.22
GABREP78334 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.65□□□□□ -0.22
GABREP78334 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 OR8T1P-201ENST00000421347 918 ntBASIC13.65□□□□□ -0.22
GABREP78334 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.65□□□□□ -0.22
GABREP78334 AC092580.1-201ENST00000433998 658 ntBASIC13.65□□□□□ -0.22
GABREP78334 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.65□□□□□ -0.22
GABREP78334 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.65□□□□□ -0.22
GABREP78334 FAM86B3P-203ENST00000523992 854 ntBASIC13.65□□□□□ -0.22
GABREP78334 AC226150.1-201ENST00000544259 466 ntBASIC13.65□□□□□ -0.22
GABREP78334 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
GABREP78334 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GABREP78334 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.65□□□□□ -0.22
GABREP78334 AC055811.3-201ENST00000584952 686 ntBASIC13.65□□□□□ -0.22
GABREP78334 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms