Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB2P52799 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB2P52799 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
EFNB2P52799 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
EFNB2P52799 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
EFNB2P52799 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB2P52799 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
EFNB2P52799 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.53□□□□□ -0.4
EFNB2P52799 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
EFNB2P52799 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB2P52799 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB2P52799 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB2P52799 PCDHA6-201ENST00000378126 3267 ntBASIC12.52□□□□□ -0.4
EFNB2P52799 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
EFNB2P52799 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
EFNB2P52799 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
EFNB2P52799 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.52□□□□□ -0.4
EFNB2P52799 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.52□□□□□ -0.4
EFNB2P52799 AP002761.4-201ENST00000565433 3361 ntBASIC12.52□□□□□ -0.4
EFNB2P52799 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
EFNB2P52799 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.52□□□□□ -0.4
EFNB2P52799 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB2P52799 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB2P52799 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB2P52799 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.52□□□□□ -0.4
EFNB2P52799 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC079776.1-201ENST00000401540 1152 ntBASIC12.52□□□□□ -0.41
EFNB2P52799 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB2P52799 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.52□□□□□ -0.41
EFNB2P52799 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC124283.3-201ENST00000570869 594 ntBASIC12.52□□□□□ -0.41
EFNB2P52799 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 AC138696.2-201ENST00000607376 223 ntBASIC12.52□□□□□ -0.41
EFNB2P52799 AC017083.2-201ENST00000608069 979 ntBASIC12.52□□□□□ -0.41
EFNB2P52799 WFDC1-204ENST00000613603 549 ntBASIC12.52□□□□□ -0.41
EFNB2P52799 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 AC064801.2-201ENST00000625052 1303 ntBASIC12.52□□□□□ -0.41
EFNB2P52799 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB2P52799 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB2P52799 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB2P52799 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB2P52799 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
EFNB2P52799 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB2P52799 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB2P52799 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB2P52799 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
EFNB2P52799 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
EFNB2P52799 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms