Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 AC073648.2-201ENST00000510116 352 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.17□□□□□ -0.14
GTF2A1P52655 MIR4321-201ENST00000592276 80 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.17□□□□□ -0.14
GTF2A1P52655 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 CICP19-201ENST00000632944 2357 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 AC009474.1-201ENST00000455096 1565 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.17□□□□□ -0.14
GTF2A1P52655 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GTF2A1P52655 AL391647.1-201ENST00000395664 511 ntBASIC14.16□□□□□ -0.14
GTF2A1P52655 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.16□□□□□ -0.14
GTF2A1P52655 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
GTF2A1P52655 GPX1P2-201ENST00000429271 606 ntBASIC14.16□□□□□ -0.14
GTF2A1P52655 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 KRT18P34-201ENST00000488218 1270 ntBASIC14.16□□□□□ -0.14
GTF2A1P52655 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.16□□□□□ -0.14
GTF2A1P52655 PRELID1P1-202ENST00000567272 903 ntBASIC14.16□□□□□ -0.14
GTF2A1P52655 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.16□□□□□ -0.14
GTF2A1P52655 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.16□□□□□ -0.14
GTF2A1P52655 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.16□□□□□ -0.14
GTF2A1P52655 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GTF2A1P52655 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 SHC1P1-201ENST00000425230 1745 ntBASIC14.15□□□□□ -0.14
GTF2A1P52655 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.15□□□□□ -0.14
GTF2A1P52655 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC14.15□□□□□ -0.14
GTF2A1P52655 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC14.15□□□□□ -0.14
GTF2A1P52655 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GTF2A1P52655 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
GTF2A1P52655 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC14.15□□□□□ -0.14
GTF2A1P52655 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GTF2A1P52655 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms