Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 AP005212.2-201ENST00000584979 510 ntBASIC17.95■□□□□ 0.46
COL15A1P39059 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
COL15A1P39059 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 AP003392.6-201ENST00000607709 325 ntBASIC17.95■□□□□ 0.46
COL15A1P39059 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 AC023908.3-201ENST00000564211 3047 ntBASIC17.95■□□□□ 0.46
COL15A1P39059 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
COL15A1P39059 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.94■□□□□ 0.46
COL15A1P39059 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 OR7E115P-201ENST00000382617 1024 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 MIR566-201ENST00000385187 94 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 MIR1301-201ENST00000408518 82 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.94■□□□□ 0.46
COL15A1P39059 BPIFB5P-201ENST00000457066 1099 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 AC063952.3-201ENST00000467756 308 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 ALG1L3P-201ENST00000503331 765 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 EEF1GP8-201ENST00000506566 1154 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.94■□□□□ 0.46
COL15A1P39059 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.94■□□□□ 0.46
COL15A1P39059 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.94■□□□□ 0.46
COL15A1P39059 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.94■□□□□ 0.46
COL15A1P39059 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.94■□□□□ 0.46
COL15A1P39059 CYP4F36P-201ENST00000589193 186 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.94■□□□□ 0.46
COL15A1P39059 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
COL15A1P39059 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.94■□□□□ 0.46
COL15A1P39059 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.94■□□□□ 0.46
COL15A1P39059 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
COL15A1P39059 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
COL15A1P39059 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.94■□□□□ 0.46
COL15A1P39059 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL15A1P39059 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
COL15A1P39059 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.94■□□□□ 0.46
COL15A1P39059 AL109809.1-201ENST00000418979 1367 ntBASIC17.94■□□□□ 0.46
COL15A1P39059 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.94■□□□□ 0.46
COL15A1P39059 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL15A1P39059 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 FAM45BP-202ENST00000592932 1624 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 BX640514.1-201ENST00000583223 1918 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.93■□□□□ 0.46
COL15A1P39059 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.93■□□□□ 0.46
COL15A1P39059 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.93■□□□□ 0.46
COL15A1P39059 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.93■□□□□ 0.46
COL15A1P39059 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL15A1P39059 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.93■□□□□ 0.46
COL15A1P39059 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.93■□□□□ 0.46
COL15A1P39059 ABHD17AP9-201ENST00000561925 548 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 AC006548.2-201ENST00000605217 529 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 AL009176.1-201ENST00000607876 650 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 AP001527.2-201ENST00000614441 631 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
COL15A1P39059 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.93■□□□□ 0.46
COL15A1P39059 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.93■□□□□ 0.46
COL15A1P39059 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 AC020910.6-201ENST00000623084 1459 ntBASIC17.93■□□□□ 0.46
COL15A1P39059 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
COL15A1P39059 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL15A1P39059 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms