Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PDE6BP35913 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6BP35913 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6BP35913 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6BP35913 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
PDE6BP35913 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 ABCD1P4-201ENST00000399687 604 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 AC092570.1-201ENST00000414446 469 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 AL080243.1-201ENST00000423293 1060 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PDE6BP35913 AC023906.1-201ENST00000486386 453 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 RN7SL147P-201ENST00000487345 298 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.52■□□□□ 0.4
PDE6BP35913 AC023968.2-201ENST00000560593 1049 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PDE6BP35913 AL136982.5-201ENST00000605222 294 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 MIR6074-201ENST00000612054 107 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 AC073869.4-201ENST00000620841 800 ntBASIC17.52■□□□□ 0.4
PDE6BP35913 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PDE6BP35913 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6BP35913 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.52■□□□□ 0.39
PDE6BP35913 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PDE6BP35913 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDE6BP35913 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PDE6BP35913 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDE6BP35913 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
PDE6BP35913 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDE6BP35913 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDE6BP35913 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6BP35913 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6BP35913 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
PDE6BP35913 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
PDE6BP35913 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDE6BP35913 RPL3P2-204ENST00000413027 1203 ntBASIC17.51■□□□□ 0.39
PDE6BP35913 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6BP35913 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6BP35913 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6BP35913 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6BP35913 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6BP35913 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 AC087203.1-201ENST00000532111 1181 ntBASIC17.51■□□□□ 0.39
PDE6BP35913 AC018846.1-201ENST00000568231 183 ntBASIC17.51■□□□□ 0.39
PDE6BP35913 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.51■□□□□ 0.39
PDE6BP35913 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.51■□□□□ 0.39
PDE6BP35913 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6BP35913 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6BP35913 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6BP35913 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6BP35913 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms