Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 AC006504.5-208ENST00000588784 2401 ntBASIC12.41□□□□□ -0.42
TNFSF4P23510 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TNFSF4P23510 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.41□□□□□ -0.42
TNFSF4P23510 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.41□□□□□ -0.42
TNFSF4P23510 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.41□□□□□ -0.42
TNFSF4P23510 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.41□□□□□ -0.42
TNFSF4P23510 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.41□□□□□ -0.42
TNFSF4P23510 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 MIR4525-201ENST00000580000 75 ntBASIC12.41□□□□□ -0.42
TNFSF4P23510 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.41□□□□□ -0.42
TNFSF4P23510 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TNFSF4P23510 AC138649.2-201ENST00000615886 705 ntBASIC12.41□□□□□ -0.42
TNFSF4P23510 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TNFSF4P23510 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.41□□□□□ -0.42
TNFSF4P23510 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TNFSF4P23510 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.41□□□□□ -0.42
TNFSF4P23510 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TNFSF4P23510 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TNFSF4P23510 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.4□□□□□ -0.42
TNFSF4P23510 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.4□□□□□ -0.42
TNFSF4P23510 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TNFSF4P23510 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TNFSF4P23510 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TNFSF4P23510 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.4□□□□□ -0.42
TNFSF4P23510 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.4□□□□□ -0.42
TNFSF4P23510 AL008707.1-201ENST00000422498 534 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.4□□□□□ -0.42
TNFSF4P23510 AC011742.3-201ENST00000439053 820 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 AL645933.1-201ENST00000440087 609 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.4□□□□□ -0.42
TNFSF4P23510 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 KRT8P13-201ENST00000463294 1010 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 RPL18P13-201ENST00000478088 569 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 AC091804.1-201ENST00000486888 567 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.4□□□□□ -0.42
TNFSF4P23510 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.4□□□□□ -0.42
TNFSF4P23510 AC013355.1-201ENST00000562625 723 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 AC005324.6-201ENST00000587972 613 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 Z98259.2-201ENST00000641583 609 ntBASIC12.4□□□□□ -0.42
TNFSF4P23510 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TNFSF4P23510 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms