Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BMP4P12644 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
BMP4P12644 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
BMP4P12644 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BMP4P12644 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 AC074338.1-201ENST00000416825 156 ntBASIC13.35□□□□□ -0.27
BMP4P12644 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 HMGB3P14-201ENST00000494195 599 ntBASIC13.35□□□□□ -0.27
BMP4P12644 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 AC104989.1-201ENST00000519711 778 ntBASIC13.35□□□□□ -0.27
BMP4P12644 SLC25A47P1-201ENST00000531577 414 ntBASIC13.35□□□□□ -0.27
BMP4P12644 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.35□□□□□ -0.27
BMP4P12644 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 AL359711.2-201ENST00000563105 872 ntBASIC13.35□□□□□ -0.27
BMP4P12644 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.35□□□□□ -0.27
BMP4P12644 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
BMP4P12644 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.35□□□□□ -0.27
BMP4P12644 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.35□□□□□ -0.27
BMP4P12644 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 KHSRPP1-201ENST00000427983 1768 ntBASIC13.35□□□□□ -0.27
BMP4P12644 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.35□□□□□ -0.27
BMP4P12644 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BMP4P12644 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.34□□□□□ -0.27
BMP4P12644 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.34□□□□□ -0.27
BMP4P12644 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.34□□□□□ -0.27
BMP4P12644 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.34□□□□□ -0.27
BMP4P12644 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
BMP4P12644 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
BMP4P12644 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.34□□□□□ -0.27
BMP4P12644 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.34□□□□□ -0.27
BMP4P12644 AC005229.1-201ENST00000392885 409 ntBASIC13.34□□□□□ -0.27
BMP4P12644 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 RPS2P32-201ENST00000439199 892 ntBASIC13.34□□□□□ -0.27
BMP4P12644 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.34□□□□□ -0.27
BMP4P12644 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.34□□□□□ -0.27
BMP4P12644 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BMP4P12644 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.34□□□□□ -0.27
BMP4P12644 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.34□□□□□ -0.27
BMP4P12644 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.34□□□□□ -0.27
BMP4P12644 AC120045.2-201ENST00000567334 178 ntBASIC13.34□□□□□ -0.27
BMP4P12644 AP001063.1-201ENST00000568332 529 ntBASIC13.34□□□□□ -0.27
BMP4P12644 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms