Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HLA-DQB2P05538 AGAP10P-201ENST00000454844 2418 ntBASIC14.58□□□□□ -0.07
HLA-DQB2P05538 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
HLA-DQB2P05538 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AL512310.5-201ENST00000551999 515 ntBASIC14.58□□□□□ -0.08
HLA-DQB2P05538 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AC243960.2-201ENST00000600996 747 ntBASIC14.58□□□□□ -0.08
HLA-DQB2P05538 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 MIR6869-201ENST00000619434 62 ntBASIC14.58□□□□□ -0.08
HLA-DQB2P05538 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 BEND3P1-201ENST00000421591 1944 ntBASIC14.58□□□□□ -0.08
HLA-DQB2P05538 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HLA-DQB2P05538 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 AC111170.3-201ENST00000624282 2464 ntBASIC14.57□□□□□ -0.08
HLA-DQB2P05538 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HLA-DQB2P05538 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms