Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.31□□□□□ -0.28
DENRO43583 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.31□□□□□ -0.28
DENRO43583 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 AC003101.2-201ENST00000612557 442 ntBASIC13.31□□□□□ -0.28
DENRO43583 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 AC011700.1-201ENST00000610409 2627 ntBASIC13.31□□□□□ -0.28
DENRO43583 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 DRD5P1-201ENST00000456605 1438 ntBASIC13.3□□□□□ -0.28
DENRO43583 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 AL359510.2-201ENST00000624958 2249 ntBASIC13.3□□□□□ -0.28
DENRO43583 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.3□□□□□ -0.28
DENRO43583 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.3□□□□□ -0.28
DENRO43583 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.3□□□□□ -0.28
DENRO43583 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.3□□□□□ -0.28
DENRO43583 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 AC027237.1-201ENST00000560942 655 ntBASIC13.3□□□□□ -0.28
DENRO43583 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.3□□□□□ -0.28
DENRO43583 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.3□□□□□ -0.28
DENRO43583 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 AL358781.1-202ENST00000321081 1360 ntBASIC13.3□□□□□ -0.28
DENRO43583 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DENRO43583 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DENRO43583 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.29□□□□□ -0.28
DENRO43583 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
DENRO43583 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
DENRO43583 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 SNORA50C-201ENST00000408535 133 ntBASIC13.29□□□□□ -0.28
DENRO43583 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.29□□□□□ -0.28
DENRO43583 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.29□□□□□ -0.28
DENRO43583 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.29□□□□□ -0.28
DENRO43583 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
DENRO43583 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.29□□□□□ -0.28
DENRO43583 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.29□□□□□ -0.28
DENRO43583 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms