Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 STX16-205ENST00000361830 4318 ntTSL 5 BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 ADGRE2-206ENST00000594294 2325 ntTSL 5 BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 JMJD7-PLA2G4B-201ENST00000342159 2966 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LINC01558Q9Y6Z2 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
LINC01558Q9Y6Z2 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SLC7A3-202ENST00000374299 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AL365181.2-201ENST00000606343 3222 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PISD-203ENST00000397500 2194 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PDIA3P1-201ENST00000471856 1510 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ZMAT4-202ENST00000315769 2250 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PCDHA4-204ENST00000618834 10557 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PMS2P4-201ENST00000412466 1052 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SPDYE21P-201ENST00000413323 827 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 CTAGE7P-201ENST00000435712 2436 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 LINC00667-205ENST00000582008 3979 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms