RNA–Protein interactions for RNA: ENST00000562280.1

LCMT1-AS2-201, LCMT1 antisense RNA 2, humanhuman

TSL 2 BASIC

Gene LCMT1-AS2, Length 2,601 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-AS2-201ENST00000562280 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
LCMT1-AS2-201ENST00000562280 HRCP23327 699 aa19.21■□□□□ 0.67
LCMT1-AS2-201ENST00000562280 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.66
LCMT1-AS2-201ENST00000562280 MYT1Q01538 1121 aa19.13■□□□□ 0.65
LCMT1-AS2-201ENST00000562280 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
LCMT1-AS2-201ENST00000562280 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
LCMT1-AS2-201ENST00000562280 PCGF6Q9BYE7 350 aa18.46■□□□□ 0.55
LCMT1-AS2-201ENST00000562280 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
LCMT1-AS2-201ENST00000562280 MYO15BQ96JP2 1530 aa17.99■□□□□ 0.47
LCMT1-AS2-201ENST00000562280 ACIN1Q9UKV3 1341 aaKnown RBP17.9■□□□□ 0.46
LCMT1-AS2-201ENST00000562280 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
LCMT1-AS2-201ENST00000562280 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
LCMT1-AS2-201ENST00000562280 NEUROD1Q13562 356 aa17.77■□□□□ 0.43
LCMT1-AS2-201ENST00000562280 GTF3C3Q9Y5Q9 886 aa17.76■□□□□ 0.43
LCMT1-AS2-201ENST00000562280 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
LCMT1-AS2-201ENST00000562280 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
LCMT1-AS2-201ENST00000562280 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
LCMT1-AS2-201ENST00000562280 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
LCMT1-AS2-201ENST00000562280 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
LCMT1-AS2-201ENST00000562280 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
LCMT1-AS2-201ENST00000562280 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
LCMT1-AS2-201ENST00000562280 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
LCMT1-AS2-201ENST00000562280 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
LCMT1-AS2-201ENST00000562280 LOC105371045A0A1W2PR82 267 aa17.31■□□□□ 0.36
LCMT1-AS2-201ENST00000562280 ANP32EQ9BTT0 268 aa17.26■□□□□ 0.35
LCMT1-AS2-201ENST00000562280 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
LCMT1-AS2-201ENST00000562280 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
LCMT1-AS2-201ENST00000562280 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
LCMT1-AS2-201ENST00000562280 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
LCMT1-AS2-201ENST00000562280 APLP2Q06481 763 aa16.95■□□□□ 0.3
LCMT1-AS2-201ENST00000562280 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
LCMT1-AS2-201ENST00000562280 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
LCMT1-AS2-201ENST00000562280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
LCMT1-AS2-201ENST00000562280 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
LCMT1-AS2-201ENST00000562280 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
LCMT1-AS2-201ENST00000562280 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
LCMT1-AS2-201ENST00000562280 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
LCMT1-AS2-201ENST00000562280 MIER1Q8N108 512 aa16.69■□□□□ 0.26
LCMT1-AS2-201ENST00000562280 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
LCMT1-AS2-201ENST00000562280 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
LCMT1-AS2-201ENST00000562280 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
LCMT1-AS2-201ENST00000562280 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
LCMT1-AS2-201ENST00000562280 MSH5O43196 834 aa16.29■□□□□ 0.2
LCMT1-AS2-201ENST00000562280 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
LCMT1-AS2-201ENST00000562280 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.19
LCMT1-AS2-201ENST00000562280 BCANQ96GW7 911 aa16.26■□□□□ 0.19
LCMT1-AS2-201ENST00000562280 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
LCMT1-AS2-201ENST00000562280 ERICH6BQ5W0A0 696 aa16.22■□□□□ 0.19
LCMT1-AS2-201ENST00000562280 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
LCMT1-AS2-201ENST00000562280 FKBP8Q14318 412 aa16.17■□□□□ 0.18
LCMT1-AS2-201ENST00000562280 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
LCMT1-AS2-201ENST00000562280 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
LCMT1-AS2-201ENST00000562280 NEFLP07196 543 aa16.06■□□□□ 0.16
LCMT1-AS2-201ENST00000562280 ITGAEP38570 1179 aa16.01■□□□□ 0.15
LCMT1-AS2-201ENST00000562280 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
LCMT1-AS2-201ENST00000562280 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
LCMT1-AS2-201ENST00000562280 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
LCMT1-AS2-201ENST00000562280 CDK11AQ9UQ88 783 aaPredicted RBP15.92■□□□□ 0.14
LCMT1-AS2-201ENST00000562280 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
LCMT1-AS2-201ENST00000562280 KCNH8Q96L42 1107 aa15.86■□□□□ 0.13
LCMT1-AS2-201ENST00000562280 NBR1Q14596 966 aa15.86■□□□□ 0.13
LCMT1-AS2-201ENST00000562280 IL27Q8NEV9 243 aa15.86■□□□□ 0.13
LCMT1-AS2-201ENST00000562280 PKNOX2Q96KN3 472 aa15.85■□□□□ 0.13
LCMT1-AS2-201ENST00000562280 SLC24A1O60721 1099 aa15.83■□□□□ 0.13
LCMT1-AS2-201ENST00000562280 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.13
LCMT1-AS2-201ENST00000562280 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
LCMT1-AS2-201ENST00000562280 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
LCMT1-AS2-201ENST00000562280 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.11
LCMT1-AS2-201ENST00000562280 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
LCMT1-AS2-201ENST00000562280 ABCC9O60706 1549 aa15.7■□□□□ 0.1
LCMT1-AS2-201ENST00000562280 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
LCMT1-AS2-201ENST00000562280 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
LCMT1-AS2-201ENST00000562280 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
LCMT1-AS2-201ENST00000562280 TRIM52Q96A61 297 aa15.64■□□□□ 0.1
LCMT1-AS2-201ENST00000562280 DAXXQ9UER7 740 aaPredicted RBP15.64■□□□□ 0.09
LCMT1-AS2-201ENST00000562280 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
LCMT1-AS2-201ENST00000562280 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
LCMT1-AS2-201ENST00000562280 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 C11orf95C9JLR9 678 aaPredicted RBP15.57■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 DHX57Q6P158 1386 aaKnown RBP15.57■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 IRX6P78412 446 aaPredicted RBP15.55■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 GLIPR1L2Q4G1C9 344 aa15.54■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 CCER2I3L3R5 266 aa15.54■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 WASHC2AQ641Q2 1341 aa15.53■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 ZBTB47Q9UFB7 747 aaPredicted RBP15.52■□□□□ 0.08
LCMT1-AS2-201ENST00000562280 IPO9Q96P70 1041 aaKnown RBP15.52■□□□□ 0.07
LCMT1-AS2-201ENST00000562280 DDX10Q13206 875 aaKnown RBP15.51■□□□□ 0.07
LCMT1-AS2-201ENST00000562280 ANP32AP39687 249 aaKnown RBP15.51■□□□□ 0.07
LCMT1-AS2-201ENST00000562280 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
LCMT1-AS2-201ENST00000562280 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
LCMT1-AS2-201ENST00000562280 USP35Q9P2H5 1018 aa15.46■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 ANP32CO43423 234 aa15.45■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 UBTFP17480 764 aaKnown RBP15.43■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 ZMYND15Q9H091 742 aa15.43■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 BRPF3Q9ULD4 1205 aa15.42■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 NACADO15069 1562 aa15.42■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 PPP1R15AO75807 674 aaPredicted RBP15.4■□□□□ 0.06
LCMT1-AS2-201ENST00000562280 NEFMP07197 916 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms