Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 AL118522.1-201ENST00000611368 560 ntBASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAK1Q9UPV9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 ST5-261ENST00000626808 1071 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 ODCP-201ENST00000459650 1639 ntBASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAK1Q9UPV9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 OR52M2P-201ENST00000414298 959 ntBASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 PGAM1P12-201ENST00000505622 748 ntBASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 PDXDC2P-206ENST00000534700 1315 ntBASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 NT5C-204ENST00000578337 582 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 MIR4265-201ENST00000582152 99 ntBASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 AC011471.3-201ENST00000623576 402 ntBASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAK1Q9UPV9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 RPL13AP3-202ENST00000494676 1473 ntBASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 AC103592.1-201ENST00000394513 664 ntBASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 RN7SL375P-201ENST00000492442 298 ntBASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 RN7SL767P-201ENST00000493013 295 ntBASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 AP005264.5-201ENST00000590066 467 ntBASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAK1Q9UPV9 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms