Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 AL136295.7-201ENST00000619226 1200 ntBASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.01□□□□□ -0.33
PARPBPQ9NWS1 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AC041040.2-201ENST00000622926 2899 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AC244394.1-201ENST00000435000 1665 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 KRT8P28-201ENST00000433288 1390 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AL008718.2-201ENST00000609206 1313 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 MIR1908-201ENST00000410394 80 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 KRTAP10-13P-201ENST00000412914 571 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AL157407.1-201ENST00000435784 904 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 RBM8B-201ENST00000555532 525 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 AL022328.3-201ENST00000607943 679 ntBASIC13□□□□□ -0.33
PARPBPQ9NWS1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PARPBPQ9NWS1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PARPBPQ9NWS1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms