Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 OR2I1P-210ENST00000642037 4691 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 BRD7P5-201ENST00000299197 1822 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 RN7SKP214-201ENST00000364208 315 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 HMGA1P1-201ENST00000415560 1062 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 RN7SL277P-201ENST00000481521 288 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC091804.1-201ENST00000486888 567 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC093752.3-201ENST00000567343 901 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AL022334.2-201ENST00000610000 484 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 KRT8P21-201ENST00000430398 1491 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 FAM90A12P-201ENST00000519497 2375 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 FAM90A24P-201ENST00000520792 2369 ntBASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
BLOC1S4Q9NUP1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.93■□□□□ 0.14
BLOC1S4Q9NUP1 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BLOC1S4Q9NUP1 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms