Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
KIAA1549Q9HCM3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
KIAA1549Q9HCM3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 MIR3180-2-201ENST00000581748 88 ntBASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC007326.1-201ENST00000604539 458 ntBASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 COX6A1P2-201ENST00000620597 330 ntBASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CHCHD2P9-201ENST00000461726 456 ntBASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 RN7SL530P-201ENST00000485097 298 ntBASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KIAA1549Q9HCM3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
KIAA1549Q9HCM3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms