Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC005014.1-201ENST00000432006 2976 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC022137.2-201ENST00000503482 481 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AL391280.1-201ENST00000506969 1062 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 RFPL4AP1-201ENST00000530883 850 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC004241.5-201ENST00000623870 2448 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AC004899.2-201ENST00000622993 3860 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 STRCP1-201ENST00000509801 5328 ntBASIC13.95□□□□□ -0.18
VPS33AQ96AX1 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VPS33AQ96AX1 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 AC007541.1-201ENST00000570282 1469 ntBASIC13.94□□□□□ -0.18
VPS33AQ96AX1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PUDPP3-201ENST00000445368 636 ntBASIC13.94□□□□□ -0.18
VPS33AQ96AX1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 ELK1P1-201ENST00000485699 580 ntBASIC13.94□□□□□ -0.18
VPS33AQ96AX1 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 AL132655.2-201ENST00000596276 594 ntBASIC13.94□□□□□ -0.18
VPS33AQ96AX1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 CU634019.7-201ENST00000624153 1185 ntBASIC13.94□□□□□ -0.18
VPS33AQ96AX1 FP236241.2-201ENST00000624906 1185 ntBASIC13.94□□□□□ -0.18
VPS33AQ96AX1 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VPS33AQ96AX1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms