Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 DRD5P1-201ENST00000456605 1438 ntBASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 AC011700.1-201ENST00000610409 2627 ntBASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 HCG4P8-203ENST00000443049 980 ntBASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 AC022616.1-201ENST00000518688 554 ntBASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 AL359510.2-201ENST00000624958 2249 ntBASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
DYNC2LI1Q8TCX1 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AL592309.1-201ENST00000443127 649 ntBASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AL662844.1-201ENST00000546340 181 ntBASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AC027237.1-201ENST00000560942 655 ntBASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AC005586.2-201ENST00000563946 837 ntBASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AC092139.4-201ENST00000624318 2794 ntBASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.72□□□□□ -0.37
DYNC2LI1Q8TCX1 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.71□□□□□ -0.37
DYNC2LI1Q8TCX1 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms