Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC005777.1-201ENST00000588332 187 ntBASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CFAP43Q8NDM7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC21.83■■□□□ 1.08
CFAP43Q8NDM7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC093300.1-201ENST00000510368 1201 ntBASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC139713.2-207ENST00000641556 1292 ntBASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 BX322534.1-201ENST00000635574 241 ntBASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 AC215524.1-201ENST00000635696 241 ntBASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CFAP43Q8NDM7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 TBC1D27-202ENST00000424239 1573 ntBASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 AC005912.2-201ENST00000619492 2400 ntBASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CFAP43Q8NDM7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 AC106881.1-201ENST00000605849 3329 ntBASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 HLA-DMA-202ENST00000395303 1007 ntBASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 AC073869.4-201ENST00000620841 800 ntBASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 AC126755.5-201ENST00000622756 267 ntBASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 AL139424.3-202ENST00000641619 917 ntBASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC21.8■■□□□ 1.08
CFAP43Q8NDM7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms