Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AC008825.2-201ENST00000603374 718 ntBASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AC018695.6-201ENST00000614011 534 ntBASIC15.36■□□□□ 0.05
RNF135Q8IUD6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF135Q8IUD6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 MIR557-201ENST00000385239 98 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC092638.2-201ENST00000441105 947 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC084752.1-201ENST00000509766 622 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 MIR3180-2-201ENST00000581748 88 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC138696.2-201ENST00000607376 223 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC073592.2-201ENST00000623062 780 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 KRT18P9-201ENST00000604826 1300 ntBASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF135Q8IUD6 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 AC020910.5-201ENST00000623668 1865 ntBASIC15.34■□□□□ 0.05
RNF135Q8IUD6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF135Q8IUD6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms