Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATP7AQ04656 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP7AQ04656 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP7AQ04656 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP7AQ04656 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP7AQ04656 ADK-205ENST00000539909 1866 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP7AQ04656 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP7AQ04656 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATP7AQ04656 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP7AQ04656 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP7AQ04656 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP7AQ04656 MAGEA7P-201ENST00000436482 942 ntBASIC20.63■□□□□ 0.89
ATP7AQ04656 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC20.63■□□□□ 0.89
ATP7AQ04656 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 OR4A49P-201ENST00000527050 632 ntBASIC20.63■□□□□ 0.89
ATP7AQ04656 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 CCND3P2-201ENST00000579393 537 ntBASIC20.63■□□□□ 0.89
ATP7AQ04656 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 AC093462.1-201ENST00000621167 1683 ntBASIC20.63■□□□□ 0.89
ATP7AQ04656 RCC2P1-201ENST00000452257 1476 ntBASIC20.63■□□□□ 0.89
ATP7AQ04656 AC024075.2-201ENST00000598112 1473 ntBASIC20.63■□□□□ 0.89
ATP7AQ04656 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP7AQ04656 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 HDGF-202ENST00000368206 960 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP7AQ04656 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP7AQ04656 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
ATP7AQ04656 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP7AQ04656 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
ATP7AQ04656 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP7AQ04656 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ATP7AQ04656 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP7AQ04656 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.62■□□□□ 0.89
ATP7AQ04656 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 CCL19-202ENST00000378800 414 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP7AQ04656 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP7AQ04656 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC20.62■□□□□ 0.89
ATP7AQ04656 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATP7AQ04656 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC20.62■□□□□ 0.89
ATP7AQ04656 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 MIR5091-201ENST00000578707 93 ntBASIC20.62■□□□□ 0.89
ATP7AQ04656 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP7AQ04656 AC004466.2-201ENST00000614749 516 ntBASIC20.62■□□□□ 0.89
ATP7AQ04656 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP7AQ04656 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP7AQ04656 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP7AQ04656 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP7AQ04656 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms