Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 MIR557-201ENST00000385239 98 ntBASIC14.13□□□□□ -0.15
CDK3Q00526 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CDK3Q00526 AL627231.1-201ENST00000394467 1125 ntBASIC14.13□□□□□ -0.15
CDK3Q00526 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.13□□□□□ -0.15
CDK3Q00526 AC019193.1-201ENST00000506678 823 ntBASIC14.13□□□□□ -0.15
CDK3Q00526 AL512310.5-201ENST00000551999 515 ntBASIC14.13□□□□□ -0.15
CDK3Q00526 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
CDK3Q00526 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDK3Q00526 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.13□□□□□ -0.15
CDK3Q00526 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
CDK3Q00526 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDK3Q00526 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.13□□□□□ -0.15
CDK3Q00526 LINC01815-202ENST00000641468 1409 ntBASIC14.13□□□□□ -0.15
CDK3Q00526 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDK3Q00526 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDK3Q00526 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDK3Q00526 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDK3Q00526 MARK2P16-201ENST00000605714 1723 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 AC020910.6-201ENST00000623084 1459 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDK3Q00526 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.12□□□□□ -0.15
CDK3Q00526 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 AC139749.1-202ENST00000617529 3139 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.12□□□□□ -0.15
CDK3Q00526 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.12□□□□□ -0.15
CDK3Q00526 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 ALG1L13P-202ENST00000519320 584 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms