Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
BCAR1P56945 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 AC113367.3-201ENST00000508316 1912 ntBASIC15.62■□□□□ 0.09
BCAR1P56945 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
BCAR1P56945 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
BCAR1P56945 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.62■□□□□ 0.09
BCAR1P56945 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.62■□□□□ 0.09
BCAR1P56945 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.62■□□□□ 0.09
BCAR1P56945 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.62■□□□□ 0.09
BCAR1P56945 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.62■□□□□ 0.09
BCAR1P56945 AL807761.2-201ENST00000422849 729 ntBASIC15.62■□□□□ 0.09
BCAR1P56945 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 RPL7P35-201ENST00000446943 740 ntBASIC15.62■□□□□ 0.09
BCAR1P56945 DUTP3-201ENST00000450025 415 ntBASIC15.62■□□□□ 0.09
BCAR1P56945 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.62■□□□□ 0.09
BCAR1P56945 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.62■□□□□ 0.09
BCAR1P56945 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
BCAR1P56945 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.62■□□□□ 0.09
BCAR1P56945 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
BCAR1P56945 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.62■□□□□ 0.09
BCAR1P56945 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BCAR1P56945 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
BCAR1P56945 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
BCAR1P56945 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.61■□□□□ 0.09
BCAR1P56945 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.61■□□□□ 0.09
BCAR1P56945 NDUFS6P1-201ENST00000485187 316 ntBASIC15.61■□□□□ 0.09
BCAR1P56945 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.61■□□□□ 0.09
BCAR1P56945 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
BCAR1P56945 AC007326.1-201ENST00000604539 458 ntBASIC15.61■□□□□ 0.09
BCAR1P56945 AC007881.3-201ENST00000608897 607 ntBASIC15.61■□□□□ 0.09
BCAR1P56945 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
BCAR1P56945 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 AC005089.1-201ENST00000619486 2241 ntBASIC15.61■□□□□ 0.09
BCAR1P56945 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
BCAR1P56945 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
BCAR1P56945 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.61■□□□□ 0.09
BCAR1P56945 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 SNX18-202ENST00000343017 3140 ntBASIC15.61■□□□□ 0.09
BCAR1P56945 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 AC015688.4-201ENST00000580780 1647 ntBASIC15.61■□□□□ 0.09
BCAR1P56945 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
BCAR1P56945 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.61■□□□□ 0.09
BCAR1P56945 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.6■□□□□ 0.09
BCAR1P56945 KRT8P31-201ENST00000504812 1408 ntBASIC15.6■□□□□ 0.09
BCAR1P56945 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BCAR1P56945 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BCAR1P56945 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
BCAR1P56945 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
BCAR1P56945 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
BCAR1P56945 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
BCAR1P56945 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
BCAR1P56945 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.6■□□□□ 0.09
BCAR1P56945 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
BCAR1P56945 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BCAR1P56945 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.6■□□□□ 0.09
BCAR1P56945 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.6■□□□□ 0.09
BCAR1P56945 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
BCAR1P56945 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
BCAR1P56945 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms