Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MAGEA5-201ENST00000446757 942 ntBASIC12.88□□□□□ -0.35
GFRA1P56159 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 CAP2P1-201ENST00000557743 1390 ntBASIC12.88□□□□□ -0.35
GFRA1P56159 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.88□□□□□ -0.35
GFRA1P56159 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
GFRA1P56159 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.88□□□□□ -0.35
GFRA1P56159 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.87□□□□□ -0.35
GFRA1P56159 RPL8P2-201ENST00000430538 502 ntBASIC12.87□□□□□ -0.35
GFRA1P56159 EEF1DP6-201ENST00000449232 372 ntBASIC12.87□□□□□ -0.35
GFRA1P56159 AP000358.1-201ENST00000456260 156 ntBASIC12.87□□□□□ -0.35
GFRA1P56159 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.87□□□□□ -0.35
GFRA1P56159 IGLV3-15-201ENST00000518356 244 ntBASIC12.87□□□□□ -0.35
GFRA1P56159 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.87□□□□□ -0.35
GFRA1P56159 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.87□□□□□ -0.35
GFRA1P56159 AC079328.1-201ENST00000560358 952 ntBASIC12.87□□□□□ -0.35
GFRA1P56159 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.87□□□□□ -0.35
GFRA1P56159 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.87□□□□□ -0.35
GFRA1P56159 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
GFRA1P56159 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
GFRA1P56159 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
GFRA1P56159 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
GFRA1P56159 TUBB8P4-201ENST00000511806 1324 ntBASIC12.87□□□□□ -0.35
GFRA1P56159 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
GFRA1P56159 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.86□□□□□ -0.35
GFRA1P56159 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.86□□□□□ -0.35
GFRA1P56159 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
GFRA1P56159 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
GFRA1P56159 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
GFRA1P56159 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
GFRA1P56159 USP17L6P-201ENST00000382470 1197 ntBASIC12.86□□□□□ -0.35
GFRA1P56159 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
GFRA1P56159 AL583805.1-201ENST00000391389 531 ntBASIC12.86□□□□□ -0.35
GFRA1P56159 AC103592.1-201ENST00000394513 664 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms