Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 AC010632.2-201ENST00000588369 1224 ntBASIC14.2□□□□□ -0.14
LIMK1P53667 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.2□□□□□ -0.14
LIMK1P53667 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LIMK1P53667 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.2□□□□□ -0.14
LIMK1P53667 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LIMK1P53667 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.19□□□□□ -0.14
LIMK1P53667 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 AC063952.3-201ENST00000467756 308 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 RPL18AP8-201ENST00000486071 528 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 GCOM2-201ENST00000509133 1104 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.19□□□□□ -0.14
LIMK1P53667 KRT8P1-201ENST00000557533 1207 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 ABHD17AP9-201ENST00000561925 548 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 CYP4F36P-201ENST00000589193 186 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.19□□□□□ -0.14
LIMK1P53667 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.19□□□□□ -0.14
LIMK1P53667 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LIMK1P53667 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.19□□□□□ -0.14
LIMK1P53667 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LIMK1P53667 AL928921.2-201ENST00000641325 2442 ntBASIC14.19□□□□□ -0.14
LIMK1P53667 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LIMK1P53667 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 AC027601.5-201ENST00000624065 2482 ntBASIC14.18□□□□□ -0.14
LIMK1P53667 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LIMK1P53667 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.18□□□□□ -0.14
LIMK1P53667 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LIMK1P53667 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.18□□□□□ -0.14
LIMK1P53667 HLA-DPA2-205ENST00000433582 733 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms