Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 ARMC1-202ENST00000458464 2849 ntTSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
GTF2A1P52655 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.18□□□□□ -0.14
GTF2A1P52655 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 RNPS1P1-201ENST00000507437 918 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.18□□□□□ -0.14
GTF2A1P52655 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 AC105339.3-201ENST00000560043 636 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.18□□□□□ -0.14
GTF2A1P52655 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 AC005593.1-201ENST00000624894 515 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 AL645728.2-201ENST00000641974 660 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 AL589702.1-201ENST00000641229 1509 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GTF2A1P52655 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC14.18□□□□□ -0.14
GTF2A1P52655 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 AL445647.1-201ENST00000606221 3599 ntBASIC14.18□□□□□ -0.14
GTF2A1P52655 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 SLC2A5-202ENST00000377424 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC14.18□□□□□ -0.14
GTF2A1P52655 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GTF2A1P52655 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.17□□□□□ -0.14
GTF2A1P52655 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 AC073439.1-201ENST00000624121 1774 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GTF2A1P52655 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.17□□□□□ -0.14
GTF2A1P52655 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
GTF2A1P52655 HNRNPDP1-201ENST00000439535 754 ntBASIC14.17□□□□□ -0.14
GTF2A1P52655 HCG4P8-203ENST00000443049 980 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms