Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NEDD4P46934 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 RN7SL530P-201ENST00000485097 298 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 AL512310.5-201ENST00000551999 515 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.89■□□□□ 0.29
NEDD4P46934 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.89■□□□□ 0.29
NEDD4P46934 MIR4754-201ENST00000582477 89 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 AC020922.3-201ENST00000595064 547 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
NEDD4P46934 AC097724.1-201ENST00000609581 426 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 AC007952.5-201ENST00000572818 1486 ntBASIC16.89■□□□□ 0.29
NEDD4P46934 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 Z97180.1-201ENST00000445173 988 ntBASIC16.88■□□□□ 0.29
NEDD4P46934 DUX4L50-201ENST00000455245 715 ntBASIC16.88■□□□□ 0.29
NEDD4P46934 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD4P46934 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.88■□□□□ 0.29
NEDD4P46934 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.88■□□□□ 0.29
NEDD4P46934 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.88■□□□□ 0.29
NEDD4P46934 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NEDD4P46934 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.88■□□□□ 0.29
NEDD4P46934 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NEDD4P46934 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.87■□□□□ 0.29
NEDD4P46934 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.87■□□□□ 0.29
NEDD4P46934 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.87■□□□□ 0.29
NEDD4P46934 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms