Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AC009093.2-202ENST00000620513 2079 ntBASIC15.71■□□□□ 0.11
CCDC172P0C7W6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AC092933.1-201ENST00000393644 945 ntBASIC15.71■□□□□ 0.11
CCDC172P0C7W6 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AC016694.1-201ENST00000434179 700 ntBASIC15.71■□□□□ 0.11
CCDC172P0C7W6 RN7SL837P-201ENST00000463010 287 ntBASIC15.71■□□□□ 0.11
CCDC172P0C7W6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 AL355385.1-201ENST00000606123 409 ntBASIC15.71■□□□□ 0.11
CCDC172P0C7W6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC172P0C7W6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC172P0C7W6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AL136309.1-201ENST00000403917 691 ntBASIC15.7■□□□□ 0.1
CCDC172P0C7W6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC233724.13-201ENST00000598383 410 ntBASIC15.7■□□□□ 0.1
CCDC172P0C7W6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC027601.3-201ENST00000622907 509 ntBASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AC006453.4-201ENST00000636949 1252 ntBASIC15.7■□□□□ 0.1
CCDC172P0C7W6 AL358472.5-202ENST00000641448 1267 ntBASIC15.7■□□□□ 0.1
CCDC172P0C7W6 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC172P0C7W6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms