Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.51■□□□□ 0.07
TUBB4AP04350 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 SNHG9-202ENST00000564014 471 ntBASIC15.51■□□□□ 0.07
TUBB4AP04350 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.51■□□□□ 0.07
TUBB4AP04350 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TUBB4AP04350 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 PCDHB19P-202ENST00000625133 2914 ntBASIC15.51■□□□□ 0.07
TUBB4AP04350 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TUBB4AP04350 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC15.51■□□□□ 0.07
TUBB4AP04350 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 STRCP1-201ENST00000509801 5328 ntBASIC15.5■□□□□ 0.07
TUBB4AP04350 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 AC254562.1-201ENST00000417586 456 ntBASIC15.5■□□□□ 0.07
TUBB4AP04350 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.5■□□□□ 0.07
TUBB4AP04350 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 RPL13AP25-201ENST00000484130 612 ntBASIC15.5■□□□□ 0.07
TUBB4AP04350 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBB4AP04350 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.5■□□□□ 0.07
TUBB4AP04350 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.5■□□□□ 0.07
TUBB4AP04350 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 AC025183.3-201ENST00000623526 1482 ntBASIC15.5■□□□□ 0.07
TUBB4AP04350 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TUBB4AP04350 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.5■□□□□ 0.07
TUBB4AP04350 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TUBB4AP04350 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TUBB4AP04350 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TUBB4AP04350 AL358781.1-202ENST00000321081 1360 ntBASIC15.49■□□□□ 0.07
TUBB4AP04350 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TUBB4AP04350 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TUBB4AP04350 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB4AP04350 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.49■□□□□ 0.07
TUBB4AP04350 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TUBB4AP04350 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB4AP04350 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TUBB4AP04350 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.49■□□□□ 0.07
TUBB4AP04350 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms