Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFPL1O75677 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RFPL1O75677 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFPL1O75677 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RFPL1O75677 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFPL1O75677 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFPL1O75677 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RFPL1O75677 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RFPL1O75677 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
RFPL1O75677 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RFPL1O75677 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RFPL1O75677 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.52□□□□□ -0.08
RFPL1O75677 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RFPL1O75677 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
RFPL1O75677 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFPL1O75677 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.52□□□□□ -0.08
RFPL1O75677 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.52□□□□□ -0.09
RFPL1O75677 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.52□□□□□ -0.09
RFPL1O75677 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.52□□□□□ -0.09
RFPL1O75677 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.52□□□□□ -0.09
RFPL1O75677 RN7SL560P-201ENST00000577943 264 ntBASIC14.52□□□□□ -0.09
RFPL1O75677 RN7SL48P-201ENST00000579283 293 ntBASIC14.52□□□□□ -0.09
RFPL1O75677 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.52□□□□□ -0.09
RFPL1O75677 AC009542.2-202ENST00000619004 1067 ntBASIC14.52□□□□□ -0.09
RFPL1O75677 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.52□□□□□ -0.09
RFPL1O75677 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
RFPL1O75677 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.52□□□□□ -0.09
RFPL1O75677 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RFPL1O75677 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.52□□□□□ -0.09
RFPL1O75677 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.52□□□□□ -0.09
RFPL1O75677 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFPL1O75677 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFPL1O75677 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFPL1O75677 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFPL1O75677 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFPL1O75677 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.51□□□□□ -0.09
RFPL1O75677 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.51□□□□□ -0.09
RFPL1O75677 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.51□□□□□ -0.09
RFPL1O75677 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RFPL1O75677 AL928654.5-201ENST00000624831 2501 ntBASIC14.51□□□□□ -0.09
RFPL1O75677 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RFPL1O75677 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.51□□□□□ -0.09
RFPL1O75677 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.51□□□□□ -0.09
RFPL1O75677 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 AL356585.2-201ENST00000625078 2396 ntBASIC14.51□□□□□ -0.09
RFPL1O75677 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RFPL1O75677 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.51□□□□□ -0.09
RFPL1O75677 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFPL1O75677 RPL13AP20-201ENST00000459725 609 ntBASIC14.51□□□□□ -0.09
RFPL1O75677 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.51□□□□□ -0.09
RFPL1O75677 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms