Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC18.92■□□□□ 0.62
APAF1O14727 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC18.92■□□□□ 0.62
APAF1O14727 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
APAF1O14727 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APAF1O14727 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 AC138028.6-201ENST00000616106 1482 ntBASIC18.91■□□□□ 0.62
APAF1O14727 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
APAF1O14727 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 AL928654.5-201ENST00000624831 2501 ntBASIC18.91■□□□□ 0.62
APAF1O14727 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.91■□□□□ 0.62
APAF1O14727 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.91■□□□□ 0.62
APAF1O14727 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
APAF1O14727 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.91■□□□□ 0.62
APAF1O14727 RN7SL774P-201ENST00000577467 290 ntBASIC18.91■□□□□ 0.62
APAF1O14727 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.91■□□□□ 0.62
APAF1O14727 AC244452.3-201ENST00000636814 210 ntBASIC18.91■□□□□ 0.62
APAF1O14727 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
APAF1O14727 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
APAF1O14727 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APAF1O14727 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC18.91■□□□□ 0.62
APAF1O14727 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.9■□□□□ 0.62
APAF1O14727 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.9■□□□□ 0.62
APAF1O14727 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.9■□□□□ 0.62
APAF1O14727 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
APAF1O14727 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
APAF1O14727 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
APAF1O14727 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.9■□□□□ 0.62
APAF1O14727 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.9■□□□□ 0.62
APAF1O14727 RN7SL277P-201ENST00000481521 288 ntBASIC18.9■□□□□ 0.62
APAF1O14727 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 SCARNA20.5-201ENST00000516991 142 ntBASIC18.9■□□□□ 0.62
APAF1O14727 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.9■□□□□ 0.62
APAF1O14727 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
APAF1O14727 MIR6787-201ENST00000616675 61 ntBASIC18.9■□□□□ 0.62
APAF1O14727 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
APAF1O14727 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
APAF1O14727 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.9■□□□□ 0.62
APAF1O14727 LINC01815-202ENST00000641468 1409 ntBASIC18.9■□□□□ 0.62
APAF1O14727 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 NIN-202ENST00000324330 4364 ntTSL 5 BASIC18.9■□□□□ 0.62
APAF1O14727 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APAF1O14727 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
APAF1O14727 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
APAF1O14727 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms