Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AC244517.3-201ENST00000616254 1235 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MIR8071-1-201ENST00000616769 65 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MIR8071-2-201ENST00000616772 65 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AC022532.1-201ENST00000624563 1728 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AC064850.1-201ENST00000413279 1398 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 FAM86FP-201ENST00000338711 969 ntBASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AL627095.1-201ENST00000414775 321 ntBASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 DUX4L31-201ENST00000446466 1136 ntBASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AL161727.1-201ENST00000457409 530 ntBASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AC104212.2-201ENST00000478813 628 ntBASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 PPY-202ENST00000587006 431 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM88BA6NKF7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM88BA6NKF7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 MIR181D-201ENST00000384853 137 ntBASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 AC079325.1-201ENST00000430386 857 ntBASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 ACTG1P23-201ENST00000437653 1074 ntBASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 AC113398.1-201ENST00000464124 406 ntBASIC16.33■□□□□ 0.2
TMEM88BA6NKF7 HNRNPA1P72-201ENST00000529511 967 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms