Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA3A0PJX4 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AC015819.3-201ENST00000624305 2674 ntBASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 POM121L8P-201ENST00000417732 1281 ntBASIC12.59□□□□□ -0.39
SHISA3A0PJX4 POM121L9P-203ENST00000441984 1285 ntBASIC12.59□□□□□ -0.39
SHISA3A0PJX4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AL359711.2-201ENST00000563105 872 ntBASIC12.59□□□□□ -0.39
SHISA3A0PJX4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AP005019.2-201ENST00000615104 511 ntBASIC12.59□□□□□ -0.39
SHISA3A0PJX4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AC005252.2-201ENST00000624630 1141 ntBASIC12.59□□□□□ -0.39
SHISA3A0PJX4 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA3A0PJX4 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SHISA3A0PJX4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SHISA3A0PJX4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 PMS2P2-201ENST00000425039 1128 ntBASIC12.58□□□□□ -0.4
SHISA3A0PJX4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 TPRX2P-201ENST00000535362 881 ntBASIC12.58□□□□□ -0.4
SHISA3A0PJX4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC015911.4-201ENST00000588022 1070 ntBASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.58□□□□□ -0.4
SHISA3A0PJX4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms