Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CAP2P1-201ENST00000557743 1390 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC064801.2-201ENST00000625052 1303 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AL583805.1-201ENST00000391389 531 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AL627231.1-201ENST00000394467 1125 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 HINT2P1-201ENST00000419438 481 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 RPSAP15-201ENST00000448168 861 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 FTLP1-201ENST00000449155 526 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 AC011498.7-201ENST00000624986 2027 ntBASIC9.89□□□□□ -0.83
LINC00588Q9Y4M8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LINC00588Q9Y4M8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms