Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 CCND3P1-201ENST00000438347 580 ntBASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 MIR4459-201ENST00000581837 66 ntBASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 MVK-217ENST00000639206 367 ntTSL 5 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 AC092115.1-201ENST00000566277 1402 ntBASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 SLC9A7P1-201ENST00000554295 3311 ntBASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
HECTD4Q9Y4D8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 UGT1A12P-201ENST00000447084 853 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 RPL10P8-201ENST00000522888 313 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AP003170.2-201ENST00000544730 786 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AL359092.2-201ENST00000423330 585 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 RBM14-205ENST00000443702 732 ntTSL 3 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 RNA5SP420-201ENST00000516997 137 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC127002.1-201ENST00000619123 455 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC015909.5-201ENST00000624336 2266 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 AC139100.2-201ENST00000616901 662 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 BX322562.1-201ENST00000617004 561 ntBASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HECTD4Q9Y4D8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
HECTD4Q9Y4D8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.13□□□□□ -0.95
HECTD4Q9Y4D8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
HECTD4Q9Y4D8 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms