Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 RPL35P9-201ENST00000446059 350 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 AP003398.1-201ENST00000531124 318 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 U62317.3-201ENST00000608319 855 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 BAP1-211ENST00000615113 489 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 AP001065.2-201ENST00000617205 644 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 LINC00244-201ENST00000625073 613 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 PDXDC2P-206ENST00000534700 1315 ntBASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SYNPO2Q9UMS6 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SYNPO2Q9UMS6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SYNPO2Q9UMS6 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AC138761.6-201ENST00000583997 1423 ntBASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 RN7SL23P-201ENST00000484055 275 ntBASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 IGHV1-12-201ENST00000518307 205 ntBASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 RN7SL357P-201ENST00000581065 298 ntBASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SYNPO2Q9UMS6 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 AC012617.1-204ENST00000586340 2305 ntBASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 CR383656.3-201ENST00000551315 183 ntBASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MIR4750-201ENST00000584564 56 ntBASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 AC138466.5-201ENST00000624002 808 ntBASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SYNPO2Q9UMS6 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms