Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 RPSAP43-201ENST00000402237 625 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 UPF3AP3-201ENST00000420996 769 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 CNN2P2-201ENST00000443536 909 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 CNN2P3-201ENST00000450201 906 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC010336.2-201ENST00000564226 506 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AL136317.3-201ENST00000618497 906 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC090643.2-201ENST00000623442 2029 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC004461.2-201ENST00000629517 803 ntBASIC12.41□□□□□ -0.42
COMMD9Q9P000 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
COMMD9Q9P000 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
COMMD9Q9P000 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 CNN2P11-201ENST00000429351 262 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AP006288.1-201ENST00000446065 395 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC112482.1-201ENST00000492080 688 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC004066.1-201ENST00000502488 802 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC073592.8-201ENST00000624126 511 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.4□□□□□ -0.42
COMMD9Q9P000 AC011840.2-201ENST00000563063 1520 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
COMMD9Q9P000 FAM95B1-212ENST00000592873 4692 ntBASIC12.4□□□□□ -0.42
COMMD9Q9P000 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms