Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 LINC01165-201ENST00000445190 1623 ntBASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.97■□□□□ 0.15
BLOC1S4Q9NUP1 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 TSPY25P-201ENST00000429463 745 ntBASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 AL161772.1-201ENST00000610494 4412 ntBASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 CICP4-201ENST00000447359 2812 ntBASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
BLOC1S4Q9NUP1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
BLOC1S4Q9NUP1 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
BLOC1S4Q9NUP1 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
BLOC1S4Q9NUP1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
BLOC1S4Q9NUP1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
BLOC1S4Q9NUP1 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.96■□□□□ 0.14
BLOC1S4Q9NUP1 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 AC026740.1-201ENST00000607068 791 ntBASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
BLOC1S4Q9NUP1 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms