Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AL451000.1-201ENST00000451300 1186 ntBASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 COQ10BP2-201ENST00000513804 724 ntBASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AL049840.2-201ENST00000602722 535 ntBASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 FKBP4P8-201ENST00000610931 1369 ntBASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 AL590824.1-201ENST00000403828 1349 ntBASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 AL022313.4-201ENST00000562756 2046 ntBASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 HMGA1P1-201ENST00000415560 1062 ntBASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 FAM21EP-201ENST00000417804 985 ntBASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 EEF1DP2-201ENST00000433698 843 ntBASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDH11XQ9BZA7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 PIFO-201ENST00000369737 746 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDH11XQ9BZA7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms