Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 AL590824.1-201ENST00000403828 1349 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC006372.4-201ENST00000624122 1543 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 GUSBP10-201ENST00000417412 665 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ERP29P1-201ENST00000442902 706 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC135983.4-201ENST00000564116 1262 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 RN7SL555P-201ENST00000584742 339 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 RPL17P45-201ENST00000586289 509 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC025262.2-201ENST00000623975 1056 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 AC009145.4-201ENST00000625119 1294 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 LINC00552-201ENST00000625151 2579 ntBASIC14.22□□□□□ -0.13
HDAC8Q9BY41 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HDAC8Q9BY41 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AC012617.1-204ENST00000586340 2305 ntBASIC14.21□□□□□ -0.13
HDAC8Q9BY41 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 MIR2392-201ENST00000584881 84 ntBASIC14.21□□□□□ -0.13
HDAC8Q9BY41 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HDAC8Q9BY41 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HDAC8Q9BY41 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC8Q9BY41 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC8Q9BY41 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HDAC8Q9BY41 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
HDAC8Q9BY41 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC8Q9BY41 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC8Q9BY41 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC8Q9BY41 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC8Q9BY41 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.2□□□□□ -0.14
HDAC8Q9BY41 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDAC8Q9BY41 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms