Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CYP46A4P-201ENST00000414953 267 ntBASIC13.17□□□□□ -0.3
LRRC46Q96FV0 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LRRC46Q96FV0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 AC090857.1-201ENST00000527400 390 ntBASIC13.16□□□□□ -0.3
LRRC46Q96FV0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 NAP1L6-202ENST00000641404 1222 ntBASIC13.16□□□□□ -0.3
LRRC46Q96FV0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 AGAP7P-201ENST00000582299 2062 ntBASIC13.16□□□□□ -0.3
LRRC46Q96FV0 AGAP14-201ENST00000624701 2060 ntBASIC13.16□□□□□ -0.3
LRRC46Q96FV0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LRRC46Q96FV0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 TUBBP5-203ENST00000508529 1334 ntBASIC13.15□□□□□ -0.3
LRRC46Q96FV0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LRRC46Q96FV0 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms