Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR4746-201ENST00000579802 71 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AC104506.1-201ENST00000609247 429 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 AL118508.1-201ENST00000613502 2345 ntBASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM43Q96BQ3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AL137244.1-201ENST00000422931 865 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 RN7SL605P-201ENST00000577229 281 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 PRMT1P1-201ENST00000604252 1009 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AC010531.8-201ENST00000623341 685 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AC020931.1-201ENST00000589622 1346 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM43Q96BQ3 AC046158.3-201ENST00000624947 2558 ntBASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CCL25-202ENST00000315626 450 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 ABCD1P4-201ENST00000399687 604 ntBASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 CTBP2P6-201ENST00000526402 1229 ntBASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC15.38■□□□□ 0.05
TRIM43Q96BQ3 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms