Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TRIM71Q2Q1W2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 ODCP-201ENST00000459650 1639 ntBASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRIM71Q2Q1W2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CHCHD2P2-201ENST00000503744 321 ntBASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 DNM1P51-201ENST00000558149 522 ntBASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC023824.1-201ENST00000562945 2975 ntBASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC023157.3-201ENST00000619086 2088 ntBASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM71Q2Q1W2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 OR52M2P-201ENST00000414298 959 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 GRPEL2P1-201ENST00000453145 339 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 AC006529.1-201ENST00000459978 637 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 RN7SL494P-201ENST00000461517 304 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 MIR4265-201ENST00000582152 99 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 AC055811.3-201ENST00000584952 686 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 AP005264.5-201ENST00000590066 467 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 AC007952.5-201ENST00000572818 1486 ntBASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms