Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDR1Q08345 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.6■□□□□ 0.41
DDR1Q08345 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
DDR1Q08345 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 RHOC-205ENST00000369636 786 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
DDR1Q08345 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
DDR1Q08345 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 OR2W2P-201ENST00000406313 909 ntBASIC17.59■□□□□ 0.41
DDR1Q08345 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 AC113347.2-201ENST00000512350 279 ntBASIC17.59■□□□□ 0.41
DDR1Q08345 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC17.59■□□□□ 0.41
DDR1Q08345 AL512310.5-201ENST00000551999 515 ntBASIC17.59■□□□□ 0.41
DDR1Q08345 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.59■□□□□ 0.41
DDR1Q08345 AC005777.1-201ENST00000588332 187 ntBASIC17.59■□□□□ 0.41
DDR1Q08345 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.59■□□□□ 0.41
DDR1Q08345 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
DDR1Q08345 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
DDR1Q08345 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.59■□□□□ 0.41
DDR1Q08345 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDR1Q08345 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
DDR1Q08345 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.58■□□□□ 0.41
DDR1Q08345 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDR1Q08345 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.58■□□□□ 0.4
DDR1Q08345 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 BCL2L12P1-201ENST00000508390 733 ntBASIC17.58■□□□□ 0.4
DDR1Q08345 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.58■□□□□ 0.4
DDR1Q08345 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 AC132825.4-202ENST00000578792 434 ntBASIC17.58■□□□□ 0.4
DDR1Q08345 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.58■□□□□ 0.4
DDR1Q08345 AC010531.8-201ENST00000623341 685 ntBASIC17.58■□□□□ 0.4
DDR1Q08345 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.58■□□□□ 0.4
DDR1Q08345 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.58■□□□□ 0.4
DDR1Q08345 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.58■□□□□ 0.4
DDR1Q08345 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDR1Q08345 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.57■□□□□ 0.4
DDR1Q08345 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DDR1Q08345 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.57■□□□□ 0.4
DDR1Q08345 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.57■□□□□ 0.4
DDR1Q08345 AJ011931.1-201ENST00000618749 2492 ntBASIC17.57■□□□□ 0.4
DDR1Q08345 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
DDR1Q08345 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.57■□□□□ 0.4
DDR1Q08345 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC17.57■□□□□ 0.4
DDR1Q08345 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDR1Q08345 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC17.57■□□□□ 0.4
DDR1Q08345 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms