Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 AC084346.2-201ENST00000607097 949 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 AC007718.1-201ENST00000621078 280 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CDK3Q00526 AC005912.2-201ENST00000619492 2400 ntBASIC14.16□□□□□ -0.14
CDK3Q00526 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDK3Q00526 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK3Q00526 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK3Q00526 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 AL022313.4-201ENST00000562756 2046 ntBASIC14.15□□□□□ -0.14
CDK3Q00526 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDK3Q00526 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 AL583805.1-201ENST00000391389 531 ntBASIC14.15□□□□□ -0.14
CDK3Q00526 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CDK3Q00526 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.15□□□□□ -0.14
CDK3Q00526 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 DUTP3-201ENST00000450025 415 ntBASIC14.15□□□□□ -0.14
CDK3Q00526 AP000358.1-201ENST00000456260 156 ntBASIC14.15□□□□□ -0.14
CDK3Q00526 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 AC016629.1-201ENST00000596579 586 ntBASIC14.15□□□□□ -0.14
CDK3Q00526 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 OR2I1P-210ENST00000642037 4691 ntBASIC14.15□□□□□ -0.14
CDK3Q00526 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDK3Q00526 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.15□□□□□ -0.14
CDK3Q00526 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.15□□□□□ -0.14
CDK3Q00526 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.15□□□□□ -0.14
CDK3Q00526 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDK3Q00526 AC091046.1-201ENST00000331871 207 ntBASIC14.14□□□□□ -0.15
CDK3Q00526 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CDK3Q00526 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 OR8T1P-201ENST00000421347 918 ntBASIC14.14□□□□□ -0.15
CDK3Q00526 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.14□□□□□ -0.15
CDK3Q00526 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDK3Q00526 AC114947.1-202ENST00000514136 344 ntBASIC14.14□□□□□ -0.15
CDK3Q00526 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.14□□□□□ -0.15
CDK3Q00526 PRKXP1-201ENST00000561423 1122 ntBASIC14.14□□□□□ -0.15
CDK3Q00526 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.14□□□□□ -0.15
CDK3Q00526 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.14□□□□□ -0.15
CDK3Q00526 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
CDK3Q00526 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.14□□□□□ -0.15
CDK3Q00526 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.14□□□□□ -0.15
CDK3Q00526 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms