Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RN7SL832P-201ENST00000607781 1756 ntBASIC13.77□□□□□ -0.21
SKP1P63208 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.77□□□□□ -0.21
SKP1P63208 AC138028.6-201ENST00000616106 1482 ntBASIC13.77□□□□□ -0.21
SKP1P63208 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.77□□□□□ -0.21
SKP1P63208 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SKP1P63208 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
SKP1P63208 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.77□□□□□ -0.21
SKP1P63208 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.77□□□□□ -0.21
SKP1P63208 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 FAM90A7P-201ENST00000382628 1395 ntBASIC13.76□□□□□ -0.21
SKP1P63208 FAM90A23P-201ENST00000400136 1395 ntBASIC13.76□□□□□ -0.21
SKP1P63208 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SKP1P63208 MIR1247-201ENST00000408206 136 ntBASIC13.76□□□□□ -0.21
SKP1P63208 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.76□□□□□ -0.21
SKP1P63208 VDAC1P1-201ENST00000439229 848 ntBASIC13.76□□□□□ -0.21
SKP1P63208 ST13P19-201ENST00000442505 1124 ntBASIC13.76□□□□□ -0.21
SKP1P63208 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.76□□□□□ -0.21
SKP1P63208 SCARNA21-201ENST00000517026 139 ntBASIC13.76□□□□□ -0.21
SKP1P63208 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.76□□□□□ -0.21
SKP1P63208 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.76□□□□□ -0.21
SKP1P63208 NAP1L6-202ENST00000641404 1222 ntBASIC13.76□□□□□ -0.21
SKP1P63208 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 STRCP1-201ENST00000509801 5328 ntBASIC13.76□□□□□ -0.21
SKP1P63208 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.76□□□□□ -0.21
SKP1P63208 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SKP1P63208 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SKP1P63208 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SKP1P63208 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SKP1P63208 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.75□□□□□ -0.21
SKP1P63208 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SKP1P63208 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.75□□□□□ -0.21
SKP1P63208 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms