Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDH6P55285 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.07■□□□□ 0
CDH6P55285 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.07■□□□□ 0
CDH6P55285 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDH6P55285 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.07■□□□□ 0
CDH6P55285 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH6P55285 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.06■□□□□ 0
CDH6P55285 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDH6P55285 FAM21FP-201ENST00000426241 1131 ntBASIC15.06■□□□□ 0
CDH6P55285 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 KLF2P1-201ENST00000447438 1042 ntBASIC15.06■□□□□ 0
CDH6P55285 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.06■□□□□ 0
CDH6P55285 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
CDH6P55285 AC100827.2-201ENST00000563214 1194 ntBASIC15.06■□□□□ 0
CDH6P55285 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 EEF1DP1-201ENST00000585891 896 ntBASIC15.06■□□□□ 0
CDH6P55285 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.06■□□□□ 0
CDH6P55285 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH6P55285 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.06■□□□□ 0
CDH6P55285 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.06■□□□□ 0
CDH6P55285 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.06■□□□□ 0
CDH6P55285 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDH6P55285 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDH6P55285 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.05■□□□□ 0
CDH6P55285 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.05■□□□□ 0
CDH6P55285 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CDH6P55285 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
CDH6P55285 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH6P55285 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CDH6P55285 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDH6P55285 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.05■□□□□ 0
CDH6P55285 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 GK-202ENST00000378941 458 ntTSL 3 BASIC15.05■□□□□ -0
CDH6P55285 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.05■□□□□ -0
CDH6P55285 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.05■□□□□ -0
CDH6P55285 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.05■□□□□ -0
CDH6P55285 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.05■□□□□ -0
CDH6P55285 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.05■□□□□ -0
CDH6P55285 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.05■□□□□ -0
CDH6P55285 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.05■□□□□ -0
CDH6P55285 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CDH6P55285 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CDH6P55285 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH6P55285 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.05■□□□□ -0
CDH6P55285 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH6P55285 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.05■□□□□ -0
CDH6P55285 LINC02486-201ENST00000604157 3000 ntBASIC15.05■□□□□ -0
CDH6P55285 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms