Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC14.02□□□□□ -0.17
HOXA6P31267 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.02□□□□□ -0.17
HOXA6P31267 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
HOXA6P31267 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HOXA6P31267 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXA6P31267 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HOXA6P31267 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.02□□□□□ -0.17
HOXA6P31267 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 AC092115.1-201ENST00000566277 1402 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 AC092896.1-201ENST00000465850 380 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 RPS18P9-201ENST00000482817 460 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.01□□□□□ -0.17
HOXA6P31267 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
HOXA6P31267 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.01□□□□□ -0.17
HOXA6P31267 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.01□□□□□ -0.17
HOXA6P31267 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.01□□□□□ -0.17
HOXA6P31267 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.01□□□□□ -0.17
HOXA6P31267 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 FBXO36P1-201ENST00000579006 471 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.01□□□□□ -0.17
HOXA6P31267 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HOXA6P31267 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.01□□□□□ -0.17
HOXA6P31267 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HOXA6P31267 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HOXA6P31267 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14□□□□□ -0.17
HOXA6P31267 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14□□□□□ -0.17
HOXA6P31267 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HOXA6P31267 DKKL1P1-201ENST00000400550 698 ntBASIC14□□□□□ -0.17
HOXA6P31267 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14□□□□□ -0.17
HOXA6P31267 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms