Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2B1P20020 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
ATP2B1P20020 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP2B1P20020 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP2B1P20020 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 SORD2P-201ENST00000558556 1069 ntBASIC16.74■□□□□ 0.27
ATP2B1P20020 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 AC009542.2-202ENST00000619004 1067 ntBASIC16.74■□□□□ 0.27
ATP2B1P20020 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.74■□□□□ 0.27
ATP2B1P20020 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP2B1P20020 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP2B1P20020 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2B1P20020 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 AC041040.2-201ENST00000622926 2899 ntBASIC16.73■□□□□ 0.27
ATP2B1P20020 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
ATP2B1P20020 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2B1P20020 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.73■□□□□ 0.27
ATP2B1P20020 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 BNIP3P42-201ENST00000454982 569 ntBASIC16.73■□□□□ 0.27
ATP2B1P20020 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.73■□□□□ 0.27
ATP2B1P20020 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.73■□□□□ 0.27
ATP2B1P20020 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ATP2B1P20020 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 BNIP3P29-201ENST00000598302 571 ntBASIC16.73■□□□□ 0.27
ATP2B1P20020 AC011447.5-201ENST00000616168 564 ntBASIC16.73■□□□□ 0.27
ATP2B1P20020 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.73■□□□□ 0.27
ATP2B1P20020 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.73■□□□□ 0.27
ATP2B1P20020 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATP2B1P20020 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2B1P20020 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2B1P20020 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ATP2B1P20020 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2B1P20020 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2B1P20020 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP2B1P20020 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms