Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.54■□□□□ 0.08
TUBB4AP04350 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TUBB4AP04350 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TUBB4AP04350 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 ELL2P1-201ENST00000413990 1906 ntBASIC15.53■□□□□ 0.08
TUBB4AP04350 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 AC004899.2-201ENST00000622993 3860 ntBASIC15.53■□□□□ 0.08
TUBB4AP04350 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.53■□□□□ 0.08
TUBB4AP04350 AC092183.1-201ENST00000469884 875 ntBASIC15.53■□□□□ 0.08
TUBB4AP04350 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.53■□□□□ 0.08
TUBB4AP04350 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 AL391069.4-201ENST00000609583 481 ntBASIC15.53■□□□□ 0.08
TUBB4AP04350 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TUBB4AP04350 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TUBB4AP04350 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.53■□□□□ 0.08
TUBB4AP04350 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.52■□□□□ 0.08
TUBB4AP04350 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBB4AP04350 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TUBB4AP04350 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TUBB4AP04350 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBB4AP04350 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBB4AP04350 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.52■□□□□ 0.08
TUBB4AP04350 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 AL627223.1-201ENST00000416693 442 ntBASIC15.52■□□□□ 0.08
TUBB4AP04350 DNAJB3-202ENST00000449667 1266 ntBASIC15.52■□□□□ 0.08
TUBB4AP04350 CEND1P1-201ENST00000451006 455 ntBASIC15.52■□□□□ 0.08
TUBB4AP04350 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.52■□□□□ 0.08
TUBB4AP04350 MEIS3P1-201ENST00000495167 958 ntBASIC15.52■□□□□ 0.08
TUBB4AP04350 ZNF890P-202ENST00000530367 1156 ntBASIC15.52■□□□□ 0.08
TUBB4AP04350 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.52■□□□□ 0.08
TUBB4AP04350 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TUBB4AP04350 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.52■□□□□ 0.08
TUBB4AP04350 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
TUBB4AP04350 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB4AP04350 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB4AP04350 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.52■□□□□ 0.07
TUBB4AP04350 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TUBB4AP04350 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TUBB4AP04350 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.52■□□□□ 0.07
TUBB4AP04350 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
TUBB4AP04350 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
TUBB4AP04350 AC108024.1-201ENST00000626286 1721 ntBASIC15.51■□□□□ 0.07
TUBB4AP04350 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TUBB4AP04350 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TUBB4AP04350 RN7SKP230-201ENST00000365642 335 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms