Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
APOC3P02656 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC3P02656 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.55□□□□□ -0.56
APOC3P02656 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC3P02656 LSINCT5-201ENST00000626215 2647 ntBASIC11.55□□□□□ -0.56
APOC3P02656 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC3P02656 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 CYP4F24P-201ENST00000586049 1580 ntBASIC11.54□□□□□ -0.56
APOC3P02656 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC11.54□□□□□ -0.56
APOC3P02656 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 AL357054.4-201ENST00000606285 2814 ntBASIC11.54□□□□□ -0.56
APOC3P02656 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 AC012618.2-201ENST00000428058 849 ntBASIC11.54□□□□□ -0.56
APOC3P02656 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 KRT18P38-201ENST00000449496 1282 ntBASIC11.54□□□□□ -0.56
APOC3P02656 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.54□□□□□ -0.56
APOC3P02656 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 NAPSB-206ENST00000562112 1266 ntBASIC11.54□□□□□ -0.56
APOC3P02656 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.54□□□□□ -0.56
APOC3P02656 AC139887.3-201ENST00000568585 713 ntBASIC11.54□□□□□ -0.56
APOC3P02656 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 AL359736.2-201ENST00000621992 437 ntBASIC11.54□□□□□ -0.56
APOC3P02656 AL138966.2-201ENST00000621997 464 ntBASIC11.54□□□□□ -0.56
APOC3P02656 AC010947.1-201ENST00000623454 693 ntBASIC11.54□□□□□ -0.56
APOC3P02656 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 CICP2-201ENST00000420675 2328 ntBASIC11.54□□□□□ -0.56
APOC3P02656 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.54□□□□□ -0.56
APOC3P02656 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOC3P02656 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC3P02656 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.53□□□□□ -0.56
APOC3P02656 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.53□□□□□ -0.56
APOC3P02656 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
APOC3P02656 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOC3P02656 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms